Discontinuities at the DNA supercoiling transition. Microstructures Created and Driven by Light: Extending the Capabilities of Optical Manipulation by Using Structures of Complex Shape and Patterned Optical Fields. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Methods for determining stability in continuum elastic-rod models of DNA. On the confinement of semiflexible chains under torsion. Effect of curvature and twist on the conformations of a fluctuating ribbon. Mapping of Single-Base Differences between Two DNA Strands in a Single Molecule Using Holliday Junction Nanomechanics. Stefanos K. Nomidis, Franziska Kriegel, Willem Vanderlinden, Jan Lipfert, Enrico Carlon.

A. A NOTE ON THE ANALYSIS OF A HETEROGENEOUS ROD-LIKE CHAIN IN DNA MODELING.

Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids.

Conformational statistics of bent semiflexible polymers. Comment on “Writhe formulas and antipodal points in plectonemic DNA configurations”. Effects of DNA-distorting proteins on DNA elastic response. Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids. Twist-bend coupling and the statistical mechanics of the twistable wormlike-chain model of DNA: Perturbation theory and beyond. We derive the entropic force on the DNA in this thesis and discuss the coupled migration and deformation of the polymer under non-uniform confinement.

Braiding DNA: Experiments, Simulations, and Models. Zev Bryant, Michael D. Stone, Jeff Gore, Steven B. Smith, Nicholas R. Cozzarelli, Carlos Bustamante. Eugene Guth and Hubert M. James proposed the entropic origins of rubber elasticity in 1941. Tests and new insights. Enrico Skoruppa, Stefanos K. Nomidis, John F. Marko, Enrico Carlon. Physica A: Statistical Mechanics and its ApplicationsBlind Predictions of DNA and RNA Tweezers Experiments with Force and Torque. Marc Emanuel, Hervé Mohrbach, Mehmet Sayar, Helmut Schiessel, Igor M. Kulić. Enrico Skoruppa, Michiel Laleman, Stefanos K. Nomidis, Enrico Carlon. Measurement of the Torque on a Single Stretched and Twisted DNA Using Magnetic Tweezers. You have to login with your ACS ID befor you can login with your Mendeley account.Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, Pennsylvania 19104 Self-Coiling of Single-Stranded Protofibrils into Rings: A Pathway of Alzheimer’s β-Peptide Amyloidosis on Lipid Membranes. Robert Schöpflin, Hergen Brutzer, Oliver Müller, Ralf Seidel, Gero Wedemann. Zev Bryant, Michael D. Stone, Jeff Gore, Steven B. Smith, Nicholas R. Cozzarelli, Carlos Bustamante. Possible Origin of the Increased Torsion Elastic Constant of Small Circular DNAs: Bending-Induced Axial Tension. L. Treuel, K. A. Eslahian, D. Docter, T. Lang, R. Zellner, K. Nienhaus, G. U. Nienhaus, R. H. Stauber, M. Maskos. A Possible Cooperative Structural Transition of DNA in the 0.25–2.0 pN Range. Twist-Induced Snapping in a Bent Elastic Rod and Ribbon. Sequence-dependent elastic properties of DNA 1 1Edited by I. Tinoco. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Multiscale modeling of nucleic acids: Insights into DNA flexibility. Igor M. Kulić, Hervé Mohrbach, Vladimir Lobaskin, Rochish Thaokar, Helmut Schiessel. Jan Lipfert, Matthew Wiggin, Jacob W.J. Conformational statistics of stiff macromolecules as solutions to partial differential equations on the rotation and motion groups. Physica E: Low-dimensional Systems and NanostructuresBending elasticity of macromolecules: Analytic predictions from the wormlike chain model. A. The thermodynamical aspects of polymeric liquids subjected to nonisothermal flow are examined from the complementary perspectives of theory, experiment, and simulation.

Fluctuating filaments:  Statistical mechanics of helices. Structure-mechanics statistical learning unravels the linkage between local rigidity and global flexibility in nucleic acids. Direct Measurement of Torque in an Optical Trap and Its Application to Double-Strand DNA. Series A: Mathematical, Physical and Engineering SciencesInvestigation of bend and shear waves in a geometrically exact elastic rod model. Rotational Optical Micromanipulation with Specific Shapes Built by Photopolymerization. Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

Korbinian Liebl, Tomas Drsata, Filip Lankas, Jan Lipfert, Martin Zacharias. The major component of elasticity of a network arises from the “ entropic elasticity ” of the individual chains.

II. Multiscale modeling of nucleic acids: Insights into DNA flexibility. Course 7 Introduction to single-DNA micromechanics. Bo Song, Marcus Elstner and Gianaurelio Cuniberti .

Torsion of DNA modeled as a heterogeneous fluctuating rod. Anomalous Conductance Response of DNA Wires under Stretching. Comment on “Writhe formulas and antipodal points in plectonemic DNA configurations”. Microstructures Created and Driven by Light: Extending the Capabilities of Optical Manipulation by Using Structures of Complex Shape and Patterned Optical Fields. Structural transitions in torsionally constrained DNA and their dependence on solution electrostatics. G. Charvin, A. Vologodskii, D. Bensimon, V. Croquette. Understanding the mechanical response of double-stranded DNA and RNA under constant stretching forces using all-atom molecular dynamics. Probing the Elasticity of DNA on Short Length Scales by Modeling Supercoiling under Tension. Physical Review E 2012, 85 (4) DOI: 10.1103/PhysRevE.85.041802. Electrostatic-Undulatory Theory of Plectonemically Supercoiled DNA. DNA superhelical structures with non-constant helical pitch. Coupling between denaturation and chain conformations in DNA: stretching, bending, torsion and finite size effects.

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